API Reference

This section contains the complete API reference for scPPIN-py.

Main API

• scPPIN Class
  • scPPIN

The main API consists of the scPPIN class, which provides methods for:

• Loading protein-protein interaction networks

• Setting node weights (p-values) and edge weights

• Detecting functional modules

• Visualizing results

Setup methods (load_network(), set_node_weights(), set_edge_weights()) support method chaining for convenient workflows. detect_module() returns the resulting igraph Graph while also storing it on model.module.